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Very low ergodicity of real genomes
Michael G. Sadovskya, Ksenia A. Nikitinab a Institute of computational modelling SB RAS, Akademgorodok, Krasnoyarsk, 660036 Russia
b Institute of Space and Information Technology, Siberian Federal University, Kirenskogo 26, Krasnoyarsk, 660074, Russia
Abstract:
A distribution of the longest distances to the nearest neighbour alongside a genetic sequence is investigated. It is shown the real DNA sequences differ basically from any model one, while the figures of the distribution prove almost lack of ergodicity in these latter.
Keywords:
order, triplet, Markov process, distance, mutual distribution.
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UDC:
57:015 + 573.2 Received: 30.08.2014 Received in revised form: 30.09.2014 Accepted: 05.11.2014
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Citation:
Michael G. Sadovsky, Ksenia A. Nikitina, “Very low ergodicity of real genomes”, J. Sib. Fed. Univ. Math. Phys., 7:4 (2014), 530–532
Citation in format AMSBIB
\Bibitem{SadNik14}
\by Michael~G.~Sadovsky, Ksenia~A.~Nikitina
\paper Very low ergodicity of real genomes
\jour J. Sib. Fed. Univ. Math. Phys.
\yr 2014
\vol 7
\issue 4
\pages 530--532
\mathnet{http://mi.mathnet.ru/jsfu397}
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http://mi.mathnet.ru/eng/jsfu397 http://mi.mathnet.ru/eng/jsfu/v7/i4/p530
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