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Mat. Biolog. Bioinform., 2013, Volume 8, Issue 2, Pages 529–536 (Mi mbb160)  

This article is cited in 1 scientific paper (total in 1 paper)

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Towards the identification of the latent periodicity in DNA sequences

E. V. Korotkovab, A. A. Shelenkovb, M. A. Korotkovaa

a Moscow Engineering Physics Institute (National Nuclear Research University)
b Bioengineering Centre, Russian Academy of Sciences, Moscow, Russia, 117312

Abstract: In this paper we compared the method of information decomposition and the spectral-statistical approach. The revealed drawbacks of the spectral-statistical approach show that to search for DNA regions with latent periodicity it is more consistent from mathematical point of view to use Z-statistic and the method of information decomposition.

Key words: latent periodicity, information decomposition, spectral-statistical approach, genes, triplet periodicity, profile periodicity.

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Received 14.10.2013, Published 21.11.2013

Citation: E. V. Korotkov, A. A. Shelenkov, M. A. Korotkova, “Towards the identification of the latent periodicity in DNA sequences”, Mat. Biolog. Bioinform., 8:2 (2013), 529–536

Citation in format AMSBIB
\Bibitem{KorSheKor13}
\by E.~V.~Korotkov, A.~A.~Shelenkov, M.~A.~Korotkova
\paper Towards the identification of the latent periodicity in DNA sequences
\jour Mat. Biolog. Bioinform.
\yr 2013
\vol 8
\issue 2
\pages 529--536
\mathnet{http://mi.mathnet.ru/mbb160}


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    This publication is cited in the following articles:
    1. V. A. Kutyrkin, M. B. Chalei, “Spektralno-statisticheskii podkhod k raspoznavaniyu skrytoi profilnoi periodichnosti v posledovatelnostyakh DNK”, Matem. biologiya i bioinform., 9:1 (2014), 33–62  mathnet
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