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Computer Research and Modeling, 2010, Volume 2, Issue 4, Pages 403–418
DOI: https://doi.org/10.20537/2076-7633-2010-2-4-403-418
(Mi crm614)
 

This article is cited in 4 scientific papers (total in 4 papers)

ANALYSIS AND MODELING OF COMPLEX LIVING SYSTEMS

Dynamics analysis of coupled synthetic genetic repressilators

I. S. Potapova, E. I. Volkovb

a Lomonosov Moscow State University, GSP-1, Leninskie Gory, Moscow, 119991, Russia
b Lebedev Physical Institute RAS, Leninskij prospekt, 53, Moscow, 119991, Russia
Full-text PDF (709 kB) Citations (4)
References:
Abstract: We have investigated dynamics of synthetic genetic oscillators — repressilators — coupled through autoinducer diffusion. The model of the system with phase-repulsive coupling structure is under consideration. We have examined emergence of periodic regimes, stable inhomogeneous steady states depending on the main systems' parameters: coupling strength and maximal transcription rate. It has been shown that autoinducer production module added to the isolated repressilator cause the limit cycle to disappear through infinite period bifurcation for sufficiently large transcription rate. We have found hysteresis of limit cycle and stable steady state the size of which is determined by ratio between mRNA and protein lifetimes. Two coupled oscillators system demonstrates stable anti-phase oscillations which can become a chaotic regime through invariant torus emergence or via Feigenbaum scenario.
Keywords: oscillator, genetic circuit, autoinducer, bifurcation analysis.
Funding agency Grant number
Russian Foundation for Basic Research 08-02-00682
Received: 28.10.2010
Document Type: Article
UDC: 577.31
Language: Russian
Citation: I. S. Potapov, E. I. Volkov, “Dynamics analysis of coupled synthetic genetic repressilators”, Computer Research and Modeling, 2:4 (2010), 403–418
Citation in format AMSBIB
\Bibitem{PotVol10}
\by I.~S.~Potapov, E.~I.~Volkov
\paper Dynamics analysis of coupled synthetic genetic repressilators
\jour Computer Research and Modeling
\yr 2010
\vol 2
\issue 4
\pages 403--418
\mathnet{http://mi.mathnet.ru/crm614}
\crossref{https://doi.org/10.20537/2076-7633-2010-2-4-403-418}
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  • This publication is cited in the following 4 articles:
    Citing articles in Google Scholar: Russian citations, English citations
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