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News of the Kabardin-Balkar scientific center of RAS, 2017, Issue 6-2, Pages 124–128 (Mi izkab228)  

COMPUTER SCIENCE. CALCULATION EQUIPMENT. MANAGEMENT

Automating the calculation of genetic similarity and genetic distances

M. A. Kazakovab

a FSBI HE "The Kabardino-Balkarian State University n.a. H.M. Berbekov", 360004, KBR, Nalchik, Chernyshevsky street, 173
b Institute of Applied Mathematics and Automation – branch of the FSBSE «Federal Scientific Center «Kabardin-Balkar Scientific Center of the RussianAcademy of Sciences», 360000, KBR, Nalchik, Shortanov street, 89-a
References:
Abstract: The construction of phylogenetic trees is the most important task in biological research. Within the scope of this research subject, there arises the problem of automating the calculation of genetic distance and genetic similarity between populations of one species. The object of the study is the succession of sequence of alleles in the loci of polytene chromosomes. The article presents the program Chironomus, written in C#, which allows to quickly and conveniently calculate the genetic distance for all the main methods. The developed program significantly simplifies genetic studies, allowing to simply enter data and obtain results simultaneously for a large number of compared populations.
Keywords: automation of computing, genetic distances, genetic similarity, chironomids, Chironomus, polytene chromosomes.
Received: 23.11.2017
Document Type: Article
UDC: 519.68
Language: Russian
Citation: M. A. Kazakov, “Automating the calculation of genetic similarity and genetic distances”, News of the Kabardin-Balkar scientific center of RAS, 2017, no. 6-2, 124–128
Citation in format AMSBIB
\Bibitem{Kaz17}
\by M.~A.~Kazakov
\paper Automating the calculation of genetic similarity
and genetic distances
\jour News of the Kabardin-Balkar scientific center of RAS
\yr 2017
\issue 6-2
\pages 124--128
\mathnet{http://mi.mathnet.ru/izkab228}
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