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Journal of Siberian Federal University. Mathematics & Physics, 2024, Volume 17, Issue 6, Pages 769–775
(Mi jsfu1209)
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Magnetic particles as a carrier to select aptamer for survivin (BIRC5), a low molecular weight protein tumor marker
Nikita S. Panamareva, Anna V. Tyumentsevab, Vasilisa V. Krasitskayaa, Ludmila A. Franka a Institute of Biophysics SB RAS, Federal Research Center KSC SB RA, Krasnoyarsk, Russian Federation
b Krasnoyarsk Scientific Center SB RAS, Krasnoyarsk, Russian Federation
Abstract:
Magnetic iron oxide nanoparticles modified with aminosiloxane ($\gamma$-Fe$_2$O$_3$@SiO$_2$-NH$_2$) were used as a carrier to select DNA aptamers for a small protein tumor biomarker survivin (BIRC5, 16.5 kDa) from a randomized synthetic DNA library by the SELEX method. Survivin was covalently immobilized on the nanoparticles’ surface. The library enrichment was monitored by solid-phase bioluminescent immunoassay and the DNA melting method. The prospects are outlined for the use of the obtained nanoparticles for the effective selection of aptamers specific to a given target.
Keywords:
DNA aptamers, survivin (BIRC5), magnetic nanoparticles.
Received: 10.08.2024 Received in revised form: 16.09.2024 Accepted: 24.10.2024
Citation:
Nikita S. Panamarev, Anna V. Tyumentseva, Vasilisa V. Krasitskaya, Ludmila A. Frank, “Magnetic particles as a carrier to select aptamer for survivin (BIRC5), a low molecular weight protein tumor marker”, J. Sib. Fed. Univ. Math. Phys., 17:6 (2024), 769–775
Linking options:
https://www.mathnet.ru/eng/jsfu1209 https://www.mathnet.ru/eng/jsfu/v17/i6/p769
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