V. V. Abzianidze, V. V. Kadochnikov, D. S. Suponina, N. V. Skvortsov, P. P. Beltyukov, V. N. Babakov, D. V. Krivorotov, E. M. Barysheva, A. V. Garabadzhiu, “X-ray structure and in silico molecular docking of a natural phaeosphaeride A derivative for targets associated with kinase cascades”, Mendeleev Commun., 33:4 (2023), 534

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Mendeleev Communications, 2023, Volume 33, Issue 4, Pages 534–536
DOI: https://doi.org/10.1016/j.mencom.2023.06.030 (Mi mendc451)

This article is cited in 4 scientific papers (total in 4 papers)

Communications

X-ray structure and in silico molecular docking of a natural phaeosphaeride A derivative for targets associated with kinase cascades

V. V. Abzianidze^a, V. V. Kadochnikov^a, D. S. Suponina^a, N. V. Skvortsov^a, P. P. Beltyukov^a, V. N. Babakov^a, D. V. Krivorotov^a, E. M. Barysheva^b, A. V. Garabadzhiu^c

^a Research Institute of Hygiene, Occupational Pathology and Human Ecology, Leningrad region, Russian Federation
^b N.N. Blokhin National Medical Research Center of Oncology, Moscow, Russian Federation
^c St. Petersburg State Institute of Technology (Technical University), St. Petersburg, Russian Federation

Full-text PDF (1452 kB) Citations (4) Supplementary materials

DOI: https://doi.org/10.1016/j.mencom.2023.06.030

Graphic abstract: X-ray structure and <i>in silico</i> molecular docking of a natural phaeosphaeride A derivative for targets associated with kinase cascades

Abstract: The structure of the lead compound, a natural phaeospha- eride A derivative AV-6, (2S,3R,4R)-3-hydroxy-6-methoxy-3-methyl-7-methylene-2-pentyl-4-pyrrolidin-1-yl-3,4,6,7-tetrahydropyrano[2,3-c]pyrrol-5(2H)-one, was unambiguously determined by X-ray crystallography. When modeling in silico the interaction of AV-6 with targets in kinase cascades, high values of the binding energy (below –9 kcal mol^-1) for some protein targets were shown. Our results identified that MAPK11, MAPK12 and AKT1 could be targets of AV-6.

Keywords: X-ray diffraction analysis, oncology, natural phaeosphaeride A, inhibition of MDR1, in silico molecular docking, kinase cascades.

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Document Type: Article

Language: English

*Supplementary materials:*
		Supplementary_data_1.pdf	(1.2 Mb)

Citation: V. V. Abzianidze, V. V. Kadochnikov, D. S. Suponina, N. V. Skvortsov, P. P. Beltyukov, V. N. Babakov, D. V. Krivorotov, E. M. Barysheva, A. V. Garabadzhiu, “X-ray structure and in silico molecular docking of a natural phaeosphaeride A derivative for targets associated with kinase cascades”, Mendeleev Commun., 33:4 (2023), 534–536

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This publication is cited in the following 4 articles:

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