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Matematicheskoe Modelirovanie i Chislennye Metody, 2017, Issue 15, Pages 119–138 DOI: https://doi.org/10.18698/2309-3684-2017-3-119138
(Mi mmcm110)
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Stochastic coding models and recognition of structural and statistical characteristics of coding sequences
V. A. Kutyrkina, M. B. Chaleyb a Bauman Moscow State Technical University
b Institute of Mathematical Problems of Biology RAS, Pushchino, Moskovskaya obl.
DOI:
https://doi.org/10.18698/2309-3684-2017-3-119138
Abstract:
The paper introduces stochastic models explaining real characteristic regularities of coding regions from genomes of various organisms. Due to the growing volume of data on sequenced genomes, there arises a problem of its computer-aided analysis. By using these models, we developed methods for recognizing the structural and statistical properties of genomic DNA sequences, which can be used to find algorithms and computer programs for the automated processing of large amounts of data. The properties of the proposed stochastic coding models are demonstrated in numerical experiments with binary recoded paragraphs of literary works in English and Italian.
Keywords:
profile line of a random string, profile periodic behaviour, periodic behaviour pattern, stochastic codon, multi-polynomial model.
Citation:
V. A. Kutyrkin, M. B. Chaley, “Stochastic coding models and recognition of structural and statistical characteristics of coding sequences”, Mat. Mod. Chisl. Met., 2017, no. 15, 119–138
Linking options:
https://www.mathnet.ru/eng/mmcm110 https://www.mathnet.ru/eng/mmcm/y2017/i15/p119
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| Statistics & downloads: |
| Abstract page: | 151 | | Full-text PDF : | 192 | | References: | 3 |
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