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Nanosystems: Physics, Chemistry, Mathematics, 2013, Volume 4, Issue 2, Pages 225–235
(Mi nano753)
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Stepwise conformation transitions for a semi-stiff ring polymer confined in a conical trap induced by the increasing external field or by cone's opening angle variation
A. Siretskiya, C. Elvingsonb, P. N. Vorontsov-Velyaminovc a Dept. of Informational Technology, SE-751 05, Uppsala University, Uppsala, Sweden
b Dept. of Chemistry, Physical Chemistry P.O. Box 523, SE-751 20, Uppsala University, Uppsala, Sweden
c Dept. of Molecular Biophysical, Physical Faculty, 198504, Saint Petersburg University, Saint-Petersburg, Russia
Abstract:
In this paper a stepwise compaction process of a ring semi-stiff polymer chain placed in a 3d conical nano-cavity and being under the action of the increasing external field is studied. Compaction from a circle-like shape to several toroidal-like loops for a three-dimensional system was observed. The thermodynamic stability of these toroidal-like structures was investigated by observing a hysteresis of the compaction-extension curves. This study extends our previous work [1] with investigation of the effect of the cone opening angle variation on the distinct shape transitions.
Keywords:
semi-stiff ring polymers, Monte Carlo, compact structures, shape transitions, confinement, nanocone.
Citation:
A. Siretskiy, C. Elvingson, P. N. Vorontsov-Velyaminov, “Stepwise conformation transitions for a semi-stiff ring polymer confined in a conical trap induced by the increasing external field or by cone's opening angle variation”, Nanosystems: Physics, Chemistry, Mathematics, 4:2 (2013), 225–235
Linking options:
https://www.mathnet.ru/eng/nano753 https://www.mathnet.ru/eng/nano/v4/i2/p225
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Abstract page: | 82 | Full-text PDF : | 28 | References: | 1 |
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