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Publications in Math-Net.Ru |
Citations |
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2024 |
| 1. |
V. A. Fedorov, E. G. Kholina, I. B. Kovalenko, “Molecular dynamics of tubulin protofilaments and the effect of taxol on their bending deformation”, Computer Research and Modeling, 16:2 (2024), 503–512  |
| 2. |
V. A. Fedorov, I. B. Kovalenko, “The impact of a catalytic site mutation on the shape and mechanics of tubulin protofilaments”, Mat. Biolog. Bioinform., 19:2 (2024), 393–401  |
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| 3. |
E. G. Kholina, I. B. Kovalenko, M. G. Strakhovskaya, “Cationic biocides tend to embed into the inner layer of the model outer membrane vesicles of gram-negative bacteria: Computational insights”, Mat. Biolog. Bioinform., 19:2 (2024), 261–275 |
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2023 |
| 4. |
V. A. Fedorov, S. S. Khruschev, I. B. Kovalenko, “Analysis of Brownian and molecular dynamics trajectories
of to reveal the mechanisms of protein-protein interactions”, Computer Research and Modeling, 15:3 (2023), 723–738 |
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| 5. |
V. A. Fedorov, I. A. Volkhin, S. S. Khruschev, T. K. Antal, I. B. Kovalenko, “Role of charged amino acid residues of plastocyanin in interaction with cytochrome b$_6$f complex and photosystem i of higher plants: a study using the Brownian dynamics method”, Mat. Biolog. Bioinform., 18:2 (2023), 434–445 |
| 6. |
V. A. Fedorov, E. G. Kholina, M. F. Bulatov, I. B. Kovalenko, “Design of a molecular dynamics model for high-performance computing of conformational changes in microtubule protofilaments associated with the anticancer drug taxol”, Mat. Biolog. Bioinform., 18:1 (2023), 105–112 |
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2020 |
| 7. |
I. B. Kovalenko, V. D. Dreval, V. A. Fedorov, E. G. Kholina, N. B. Gudimchuk, “Microtubule protofilament bending characterization”, Computer Research and Modeling, 12:2 (2020), 435–443 |
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2013 |
| 8. |
D. M. Ustinin, I. B. Kovalenko, G. Yu. Riznichenko, A. B. Rubin, “Combination of different simulation techniques in the complex model of photosynthetic membrane”, Computer Research and Modeling, 5:1 (2013), 65–81 |
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| 9. |
S. S. Khruschev, A. M. Abaturova, A. N. Diakonova, D. M. Ustinin, D. V. Zlenko, V. A. Fedorov, I. B. Kovalenko, G. Yu. Riznichenko, A. B. Rubin, “Multi-particle brownian dynamics software ProKSim for protein-protein interactions modeling”, Computer Research and Modeling, 5:1 (2013), 47–64 |
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2009 |
| 10. |
A. M. Abaturova, I. B. Kovalenko, G. Yu. Riznichenko, A. B. Rubin, “Investigation of complex formation of flavodoxin and photosystem 1 by means of direct multiparticle computer simulation”, Computer Research and Modeling, 1:1 (2009), 85–91 |
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2003 |
| 11. |
I. B. Kovalenko, A. G. Kushner, “The non-linear diffusion and thermal conductivity equation: group classification and exact solutions”, Regul. Chaotic Dyn., 8:2 (2003), 167–189   |
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